CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_34000226
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_34000226
T139504_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_34000226
C2H2 ZF
159
181
YMCWQCGFRTDDKSGLSQHMETH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
185
207
YRCDQCGYSVANKTDLDIHLAKH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
213
235
YMCGECGYRANQKSHLSRHMKIH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
241
263
YKCDQCDYSASRKYFLDNHVRKH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
576
598
HKCDQCDYSAAHKSHLNRHLRKH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
626
649
YKCGQCDYSAAGKSNLDRHIAAKH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
655
677
YMCGKCGYRAAQKSDLSKHMRTH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
683
705
YKCDQCDYSAADQSWLVKHKRKH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
711
733
YMCDECGYRSDRKPILAQHMRTH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
739
761
YKCDQCDYSAAQKHHLIDHQTRH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
767
789
YMCGECGYRAAQRYTLSRHMKTH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
795
817
YKCDKCDHSAAEKHHLIDHQTRH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
823
845
YMCGECGYRAAQRSTLSQHMRIH
fgenesh2_pg.scaffold_34000226
C2H2 ZF
851
873
YKCDQCDYSTVQKSHLNRHVRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found