CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_35000094
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_35000094
T139509_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_35000094
C2H2 ZF
10
32
HQCSKCDKQFRSRSGLMEHLRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
38
60
YECEKCNKQFSKLGNLNTHVRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
66
88
YRCEQCSKQFSVLVSLKLHIRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
94
116
YRCEECSRQFSQLISLKAHIRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
122
144
YKCEQCSKQFSVRGSLQKHMRSH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
150
172
YRCEKCSRQFSERRSLQKHMKTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
178
200
YNCEECSRQFSELGQLKSHMKTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
206
228
YPCKECSKQFSHLWNLKTHMRIH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
256
278
YRCEECSKQFSQLDYLKAHIRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
284
306
YKCEQCSKQFSVHSSLKKHMRSH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
367
389
NKCSKCDKQFRSRSGLMEHLRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
395
417
YECEKCNKQFSKLGNLNTHVRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
423
445
YRCEQCSKQFSVLVSLKLHIRTH
fgenesh2_pg.scaffold_35000094
C2H2 ZF
451
473
YRCEECSRQFSQLISLKAHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found