CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_367000011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_367000011
T139520_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_367000011
C2H2 ZF
12
34
YKCEECSRQFSRLSHLKQHIQTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
40
62
YTCEECSRKFSELGNLKKHMRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
68
90
YKCEECSRQFRRLGHLKAHMQTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
102
124
YKCEECSKQFRNLVNLKTHMRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
130
152
YRCEECSRQFSQLSNLKKHMQTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
158
180
YKCEECNKQFSQLGNLKTHMRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
186
208
YRCEKCSRQFSDLVSLKTHIRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
214
236
YKCEECSKQFSHLGSLQKHMQTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
242
264
YMCEECNRQFSELGHLKRHMRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
270
291
YKCEECSKLFSRPEELKKHIRQ
fgenesh2_pg.scaffold_367000011
C2H2 ZF
307
329
YKCEECSKQFSQLSNLKKHMRTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
335
357
YKCEECSKQFSQLCHLKGHMQTH
fgenesh2_pg.scaffold_367000011
C2H2 ZF
363
387
YKCEQCSKQFSQLSNLKTHIKSKLH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found