CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_369000029
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_369000029
T139522_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_369000029
C2H2 ZF
36
58
YTCGRCKQIFSSLCEITLHMHAH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
64
86
YRCYVCGKKFFDVTHLLAHVRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
92
114
YKCEECGSQFNTPSARKRHMQTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
120
142
YKCEECSKQFMLPSLLTSHMLTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
150
172
YSCDLCSKKFQHKGGLKTHMLIH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
178
200
YGCMECGKQFRSQYNLKAHMHTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
206
228
YQCEECSKQFSTLSDCRRHMKTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
234
255
YKCEKCSKQFKTSGYLKTHALT
fgenesh2_pg.scaffold_369000029
C2H2 ZF
258
280
YACDVCEKKFQYQCNLTEHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
286
308
YSCEECSRQFSFQCSLKRHVRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
314
336
YSCEVCGKQFTDASSRNKHMWTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
344
366
YKCDECSKHFVTLSGLKSHTMTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
372
394
YSCDLCNREFRHRYGLKIHMQTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
400
422
YGCKECGKQFSQASNLKQHMFTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
428
450
YKCDQCSKEYSVLSCLNAHLKTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
456
478
YMCEKCGMCYRTMSRLKEHMLTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
484
506
HMCEKCGMQFRTVINLKDHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
512
534
YRCEKCSKQFARMAHLRLHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
540
562
YRCEKCGKQFSDSSSCRRHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
568
590
YSCEECGKQFIELGGLRSHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
596
618
YNCKECSRQFRQPSALKSHMLTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
624
646
HSCEYCSKTFCFASELKRHMRTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
652
674
YSCKECSKSFSHTNDLKKHMFTH
fgenesh2_pg.scaffold_369000029
C2H2 ZF
680
704
FCCEECNKGFCSAKDLRSHTRTLTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found