CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_369000043
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_369000043
T139524_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_369000043
C2H2 ZF
88
110
YICDECGYRTARKSDLSQHIRTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
116
138
YKCDQCDYSAAHKSDLSRHLTMH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
144
166
YMCGECGYRAARKFYLSEHMRIH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
172
194
YKCDQCDYSTSRKFSLDQHLVKH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
200
222
YSCDQCDYSAARKSTFKQHLAKH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
228
250
YMCGECGYRSTLKSTLSRHMKTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
256
278
YRCDQCDYSTAQKANLDRHLAKH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
284
306
YMCGDCGYRTAWQSELSRHMRTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
312
329
YKCDQCDYSAAHKANLTD
fgenesh2_pg.scaffold_369000043
C2H2 ZF
413
435
YICDECGHRTVRKSDLSQHMRTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
441
463
YKCDQCDYSAAKKCHLKYHLANH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
469
491
YMCGECGYRTTQKCNLTQHMRTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
497
519
YKCDQCDYSAARKHHLDQHLAKH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
525
547
YMCGECGYRAARKSDLSIHMRTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
553
575
YKCDQCDYSATKKCNLHYHLAKH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
581
603
YMCGECGYRTVLKSDLAKHMTTH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
609
631
YKCDQCDYSAALKSSLDRHLAMH
fgenesh2_pg.scaffold_369000043
C2H2 ZF
637
658
YMCGECGYRTVRKSHLSRHMRN
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found