CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_37000136
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_37000136
T139525_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_37000136
C2H2 ZF
45
67
YKCDQCDYSAALKSSLDSHVLKH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
73
95
FMCGQCGYRAAHKSNLSKHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
101
123
YKCDQCDYSAGSKFALNQHVSTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
129
151
YMCGECGYRAAQTSHINRHMRIH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
157
179
FKCEHCDYSAAQKSVLNSHLAKH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
185
207
YMCGVCGYRATRKSHLSDHMKSH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
213
235
FLCEVCGYKTAHKSHLTVHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
244
266
YMCGECGYRAKQKSHLSDHMKTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
272
294
LMCDQCGYRTAKKSHLAQHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
300
322
YMCGECGFRTTMRANLSFHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
333
355
FKCDECGYRAARQLHLSQHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
361
384
YKCDECDYSAALKSSLDSHRLLKH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
390
412
FMCGECGYRTAYKPALSKHMRTH
fgenesh2_pg.scaffold_37000136
C2H2 ZF
443
466
FMCEECGYRSTQKSTLSQHMRTHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found