CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_39000016
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_39000016
T139531_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_39000016
C2H2 ZF
50
72
YRCEECSKQFKLLGHLKVHIRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
78
100
YRCEKCNGQFRSPDHLKLHQRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
106
128
YKCKDCGKQFSQIAHLKTHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
134
156
YKCEECSKQFSQLVHLKTHIRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
162
184
YTCEDCSMQFSQGSDLKRHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
190
212
FMCEECSWHFTDLSNLKKHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
218
240
HRCEECSRQFSALSDLKRHMKTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
246
268
YRCEECSKQFRRRSHLKSHMLTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
274
296
YRCEECSKQFGLPGHLKIHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
302
324
YTCEGCRKQFSTLSALKSHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
330
352
YKCEECSKQFGRPCDLKIHMRTH
fgenesh2_pg.scaffold_39000016
C2H2 ZF
358
380
YRCEECSRQFSTLTGLKAHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found