CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_39000122
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_39000122
T139532_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_39000122
C2H2 ZF
22
43
YLCEECNRQFSRLRDLKRHMCT
fgenesh2_pg.scaffold_39000122
C2H2 ZF
50
72
YKCEECSRQFSQLSRLKTHMHSH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
78
100
YNCEKCSKQFSQLGTLNRHRRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
106
128
YKCEECSRQFSVLSNLKTHIRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
134
156
FKCDECSKQFSELGTLKIHMLTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
162
184
YKCKECSKQLTQLSHLKTHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
190
212
YSCEECSKQFSTSCGLKTHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
218
240
YKCEECSKHFSALADLKKHRRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
246
268
YKCEECSKQFRHVGSLKSHRRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
274
296
YKCEECSKQFSQQQHLKIHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
302
324
FKCEECMRQFSTLDTLKIHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
330
352
CKCDECSRQFSTPGQLKSHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
358
380
YRCEKCSRQFSHLSYLKLHVRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
386
408
FKCEECLKQFSQLAHLKSHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
414
436
YACEECSKQFSNLCSLKTHKRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
442
464
YRCDECSRQFSQLGSLKTHMRSH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
484
506
YKCEECSRQFGQLSHLKTHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
512
534
YKCEECSRQFSQPGTLMRHKRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
540
562
YKCEECSRQFSVLSNLKTHIRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
568
590
FKCEECSRQFGRLSYLKTHMRSH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
596
618
YKCEECSKQFSHLQSLKKHVRIH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
624
646
YKCEECSKQFSQQSHLKTHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
652
674
YKCEECSKQFSQLIDLKRHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
680
702
YKCEECSRQFSRLGTLKSHMRTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
708
730
YKCENCSREFSRLNTLKTHMHTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
743
765
SSCVECSRQFSELSSLKSHMWTH
fgenesh2_pg.scaffold_39000122
C2H2 ZF
771
793
YTCVVCSKRFCHLSTIKKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found