CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_39000123
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_39000123
T139533_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_39000123
C2H2 ZF
24
46
YLCEECNRQFARLYSLKRHKQTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
52
74
YKCEECNRQFSQLSRLKTHMHSH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
80
102
YKCEECSKQFSQLQSLKTHVRSH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
108
130
YKCDECSKQFSHLQSLKSHVRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
148
170
YKCEECSKQFSPSGSLKSHMRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
176
198
YKCEECSKQFSHLHNLKSHMRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
204
226
YKCEKCSKQFSQQQHLKTHMRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
238
260
FKCEECPKQFNQLGHLKHHVRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
266
288
YKCEECLKQFSQLAHLKTHMRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
295
316
RCEECSGQFSELGALKRHMRTH
fgenesh2_pg.scaffold_39000123
C2H2 ZF
322
344
YRCEVCSKKFSSLSNMKSHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found