CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_400000010
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_400000010
T139535_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_400000010
C2H2 ZF
36
58
YKCDQCDYVATQKSNLDRHMAKH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
64
86
YRCDRCGYRTAYKSTIVRHITKH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
92
114
FTCKQCGLGAASQSNLVVHMRTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
120
142
YQCEQCEYSAAQKHNFVLHMRKH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
148
170
YACAECGHKMASKSELISHVRIH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
176
198
HKCDQCDFSTAHRTSFTQHKLTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
204
226
YQCEVCAYRTGQKEHLARHMKTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
232
254
YVCGVCGHRTGDKYNLARHMRTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
260
282
FKCDQCDYSSARKSHLDLHVLTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
288
310
YVCEECGHRSAGWSNMARHKKQH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
316
338
YKCELCNFSATQKNNLARHMHQH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
344
366
HACSKCDFRTAHKVSLTSHMRKH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
372
394
YKCDMCDYCTAFRSNLARHKATH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
400
422
YMCGECGFRSGNRAALSRHVKTH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
456
478
FICEQCGYRSVEKAQLARHIRSH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
484
507
YKCDQCDFAAADTSYLTRHILKHH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
513
535
YRCETCGFRTNDPSVLYHHRRKH
fgenesh2_pg.scaffold_400000010
C2H2 ZF
541
563
YKCDQCDYASTQKRSLAWHRLDH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found