CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_407000004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_407000004
T139540_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_407000004
C2H2 ZF
184
206
YKCEECGYRTGKRSDLSRHIRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
212
234
FKCVQCNYSASQKSHLEQHVAKH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
243
262
GECGYKTAQMSELSRHMRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
268
290
YMCDQCDYSAAVKSHLDRHLRKH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
296
318
YMCGECGFRANYKVSLSRHMRIH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
324
346
YKCDQCDYSSAQKWNLVQHLSQH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
352
374
YICGECGYRTARKDDLSRHMKTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
572
594
YMCGECGFSSVQKSGLSKHMRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
600
622
YKCDKCDYSAARKCNFYRHLMKH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
628
650
YMCGECGYRTTQRGHLSRHMRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
656
678
YKCDQCDYSAAHKFDLDQHLSKH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
684
706
YMCGECGYRAARKQHLSLHMRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
712
734
YKCDQCDYSAAHKSSLDQHLPKH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
740
762
YMCDECGYSTADRSNLTVHMRTH
fgenesh2_pg.scaffold_407000004
C2H2 ZF
768
790
FKCDQCDYSAAQKSHLDRHLRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found