CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_407000005
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_407000005
T139541_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_407000005
C2H2 ZF
41
63
YKCEECGYRTGKRSDLTRHIRTH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
69
91
FKCVQCNYSASQKSHLEQHVAKH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
97
119
YMCGECGYKTAQMSELSRHMRTH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
125
147
YMCDQCDYSAAVKSHLDRHLRKH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
153
175
YMCGECGFRANYKVSLSRHMRIH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
181
203
YKCDQCDYSSAQKWNLVQHLSQH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
209
231
YICGECGYRTARKDGLSRHMKTH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
237
259
YMCDQCDYSAARKSYLDNHLTQH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
265
287
HLCGECGYRTAKKSHLAEHLRIH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
293
315
YMCGECGYRATQRYNLSRHMRTH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
321
343
YKCGQCDYSAADKSALDSHLAKH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
349
371
YMCGECGYRANYKVSLSRHMRTH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
377
399
YKCDQCDYSASQKQHLIDHQTRH
fgenesh2_pg.scaffold_407000005
C2H2 ZF
405
427
YMCGECGYMAAQRSTLSRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found