CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_422000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_422000002
T139550_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_422000002
C2H2 ZF
1
22
MCGECGYRAAHKSGLSRHLRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
28
50
FKCDQCDYSAAQKCDLQKHVTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
56
78
YMCGECGYRAARKSHLSQHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
84
106
YKCDQCDYSAAQKSTLDKHVAKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
112
134
YMCGECGYRTTRKDSLSQHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
148
170
YKCDQCDYSAAEKSNLVRHVTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
176
198
YMCGECGYRTTQKHTLLRHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
204
226
YKCDQCDYSAAEKSTLDDHMTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
232
254
YMCGECGYRTALRANLSRHMKTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
260
282
YKCDQCNYSAARKSDLSFHVKRH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
288
310
YKCDHCDYSTTQKSSLDIHLAKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
316
338
YMCDKCGYRAACKSNLSRHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
344
366
YKCDQCDYSAAEKCALVRHVTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
372
394
YMCGECGYRTAYKSDLSKHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
400
422
YKCDQCDYSAAQKSSLDQHLAKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
428
450
YMCGECGYRTTYKSDLSKHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
456
478
YKCDHCDYSAAQKFNVDQHLTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
484
506
YMCEECGYRAARRSHLSRHKRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
512
534
YMCGECGYRTDRKCNLSRHMKTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
554
576
YMCGECGYRAAYKSDLSRHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
582
604
YKCDQCDYSAAEKSNLVRHVTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
610
632
YMCGECGYRTTQKHTLLRHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
638
660
YKCDQCDYSAAEKSTLDDHMTKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
666
688
YMCGECGYRTALRANLSRHMKTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
694
716
YKCDQCNYSAARKSDLSFHVKRH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
722
744
YKCDHCDYSTTQKSSLDIHLSKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
750
772
YMCGECGYRTARKSDLSIHMRTH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
778
800
YKCDQCDYVSSRKSNLDQHVRKH
fgenesh2_pg.scaffold_422000002
C2H2 ZF
806
828
YKCGECGYRTAHKSHLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found