CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_43000155
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_43000155
T139552_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_43000155
C2H2 ZF
74
96
FVCTECDYRTASKANLVKHTRTH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
102
124
YKCEQCDYSAAQKGTLDLHLTKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
130
152
FMCGQCGYRTANRSYLSVHMRSH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
158
180
YKCDLCDYSAAQKGHLDDHRARH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
287
309
YKCGQCDYSAAQKCTLDRHLTKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
315
337
YMCGECGFRTAARYSLTVHMRSH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
343
365
YKCDQCNYSAAQKGDLNSHKTTH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
371
393
YMCGECGYRTAIRSNLTVHLRIH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
399
421
YKCDQCDYSATRKSGLDKHKAKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
427
449
FMCGECGYRTAQRCHLSRHMTTH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
496
518
YKCEQCDYSAAQKCALDRHMTKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
524
546
YMCGECGYRTAYMDALTVHMKRH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
552
574
FKCDQCTFSAVAKGELDQHMTKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
580
602
YMCGECGFRTAARYSLTLHMRSH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
608
630
YKCDQCNYSATQKANLDSHMAKH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
636
658
FVCVECGYRTAHRCNLTVHLRIH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
664
686
YKCDQCDFSAKKKSGLDQHMATH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
692
714
FMCGECGYRTAQRCHLSRHMTTH
fgenesh2_pg.scaffold_43000155
C2H2 ZF
720
742
YKCDQCDYSVTDKRHLKKHLEKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found