CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_43000161
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_43000161
T139554_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_43000161
C2H2 ZF
109
131
FECTECDYTAAKKYCLVIHTRIH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
137
160
YKCGQCDYCARQKSSLDLHRTTKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
166
188
LMCDECEYRTADRSNLSVHMRLH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
194
216
FKCGQCDYSTARKGNLDRHMAKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
222
244
YMCGDCEYKTADRSSLAVHLRKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
250
272
YKCDQCDYSAAKKDNLDRHMAKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
385
405
KCDICDYSAAKKDHLESHMDK
fgenesh2_pg.scaffold_43000161
C2H2 ZF
412
434
FMCVECGYRTAHKSHLTAHMRSH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
440
462
YKCDQCDYSATHKSQLDRHMAKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
468
490
FLCGECGYRTADRSSLTVHMRTH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
496
518
YKCDLCDYSTAQRGNLDRHMAKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
524
546
YICGECGYRSADRSALKSHMVKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
552
574
YTCDYCDYSAARKFHLDRHMAKH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
580
602
FMCGKCGYRAADLSYLTVHMRTH
fgenesh2_pg.scaffold_43000161
C2H2 ZF
608
630
YKCDQCDYSATRKDYLEKHLIKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found