CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_435000016
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_435000016
T139557_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_435000016
C2H2 ZF
10
33
YKCDQCDYSAARKSTLDNHTLAKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
39
61
YMCGECGYRTADRSTLSRHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
67
90
YKCDRCDYSAAVKCNLDNHIAAKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
96
118
YKCDQCDYSVALKSHLDRHLRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
124
146
YMCGECGYMTAYKSDLSKHKRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
152
174
YKCDQCDYSAADNTTLTNHQKKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
212
234
YMCVECGYRATQKAHLSRHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
240
262
YKCDQCDYSATQKSTLDRHQRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
272
294
YKCDQCDYSVALKSHLDRHLRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
300
322
YMCGECGYRTAYKSDLSKHIRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
328
350
YKCDQCDYSAADNTTLTNHQKKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
356
378
YMCGECGFRTTRKSILSAHVRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
384
406
YKCDQCDYSAGQKCDLDKHVVKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
412
434
YMCGECGYRTARKSDLSKHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
440
462
YKCYQCDYSAPQKNHLDLHLLKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
468
490
YMCGECGYRTALKTNLSRHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
496
518
YKCDQCDYSAAQKDTLDAHVATH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
524
546
YTCEECGHSTTTKSHLSRHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
552
574
YKCDQCDYSAAVKSSLDQHLAKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
580
602
YMCEECGYRTARNFDLSKHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
608
630
YKCDQCDYSAAQKQHLHSHLAKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
636
658
YMCGECGHRAARKSHLMVHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
664
686
YKCDQCDYSTAQKGMLDQHLMKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
710
732
YICGECGYRTERKSNLSQHTRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
738
760
YKCDQCDYSAARKSSLDKHLQIH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
766
788
YMCGECGYRTSQKSYLSRHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
794
816
YKCDQCDYSAAQKPHLDRHLRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
822
844
YMCGECGYRATLKSYLSKHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
850
872
YKCDQCDYFAARKSNLDRHLRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
878
900
YMCGECGYRATLKSYLSKHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
906
928
YKCDQCDYFAARKSNLDRHLRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
934
956
YMCGECGYRAAQMSDLSKHMRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
962
984
YKCDQCDYSAADQSWLVKHKRKH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
990
1012
YMCDECGYRSDRKPTLAQHIRTH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
1018
1040
YKCDQCDYSAAVKHHLIDHQTRH
fgenesh2_pg.scaffold_435000016
C2H2 ZF
1046
1068
YMCGECGYRAAQRATLSNHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found