CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_449000042
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_449000042
T139560_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_449000042
C2H2 ZF
74
96
FLCAECEFRAASKSNLIKHTRTH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
102
125
YKCDQCDYAAARKYTLDIHMAGKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
131
153
YICGKCGYTTAERSHQSVHIRNH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
159
181
FQCEQCDYAAASRSTLDRHMAKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
265
287
FLCTECDYRAATNANLIKHTRTH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
293
315
YKCDQCDYAATCKGSLDRHMANH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
321
343
YICGHCGYRTTERCRLTQHMRKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
349
371
YKCDQCDLSYAHKVSLDRHRLTH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
377
399
FLCGQCEYRTTNRYYLSDHMRIH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
405
427
YKCDQCDYSAAQKGTLDRHMHRH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
433
455
YICGECGFRTPDKSSLTRHMRRH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
461
483
YKCDQCDYSAAQKFALDRHMAKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
489
511
FICGKCEYKTNVLSSLTIHMKKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
517
539
FMCGECGYRTAYRRSLTVHMRTH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
545
567
YKCDQCDYSAAKKANLDRHMATH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
573
595
YMCGECGYRTARKIDPSRHMIKH
fgenesh2_pg.scaffold_449000042
C2H2 ZF
601
623
YKCDQCDFSATKKKYLDDHLAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found