CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_449000046
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_449000046
T139562_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_449000046
C2H2 ZF
86
108
FECTECSYTTTKKDKFVRHTRIH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
114
136
FKCDRCDYSAAEKSTFKYHMAQH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
142
164
YKCGECEYRTAMKSHLSEHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
170
192
YKCDQCDYSGASKSNLDQHMAKH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
198
220
YVCGECGFRTAAKSSLTRHMRTH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
254
276
YVCGECGYRTAVRSHLTVHMRKH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
364
386
FECTECDFTTTKKDTFVIHTRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
392
414
YKCDRCDYSTAGKSTFRYHMAQH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
420
442
YMCGECGYRTAMKSHLSEHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
448
470
YKCDQCDYSGASKSNLDQHMVKH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
475
497
YVCGECGFRTAAKSSLKVHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
503
525
LQCDQCDYSATRKRTFNYHMAQH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
531
553
FKCGECEYRTAIKSHLTEHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
559
581
YKCDQCDYSGASKSNLDQHMAKH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
587
609
YVCGECEFRTAAKSSLKVHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
615
637
FKCDQCGYSAARKSQLYRHMATH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
643
665
YMCGECEYRTADRSYLTVHMRSH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
759
781
YKCGECEYRTAMKSHLTEHMRRH
fgenesh2_pg.scaffold_449000046
C2H2 ZF
787
809
YRCDQCDYSGASKSNLDQHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found