CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_496000022
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_496000022
T139569_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_496000022
C2H2 ZF
1
22
MCNVCGYGTAKRPEFSKHMKIH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
33
55
YMCGECGYKTAESSHLFRHMRTH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
61
83
YKCGQCDYSAAQKSNLGNHLLTH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
89
112
FKCDQCDYSAAQKRTLNIHTAAKH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
118
140
YMCGECGFRTTQRSSLSQHMRRH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
146
169
FKCDQCDYSAVQKANLDYHIAAKH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
175
197
YKCDQCDYFAAKKSHLYNHLLTH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
203
225
FKCDQCDFSAAQKINLVTHQTTH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
231
253
YMCGECGYRAAQRSNLSQHMRRH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
259
282
FKCDQCDYYAAQKTNLDYHIASKH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
288
310
YMCGECGYRTAFKSNLSQHMRTH
fgenesh2_pg.scaffold_496000022
C2H2 ZF
344
366
YMCGECEYRTVQKSDLSQHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found