CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_510000016
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_510000016
T139573_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_510000016
C2H2 ZF
17
39
YLCGECGYRTGRKSNLSRHMRTH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
45
68
YKCGQCDYSAAQKAHLDLHHLDKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
76
98
YICDECGYKTARKSHLSRHVRVH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
104
127
YKCDQCDYSASQKSTLNTHHILKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
133
155
YICGECGYRAALKSTLARHMRTH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
161
183
YKCDQCDFSAAQKSSFNLHVAKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
189
211
FVCDNCGYKTGLKSNLSRHVRIH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
217
239
FKCDECDYSAADKSSLNTHCLKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
250
272
YMCDKCGYRTALKSTLTRHMRTH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
278
301
YKCDQCDYSAAQKAYLDLHYLAKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
307
329
YMCDECGYKTALKSSLSQHVRIH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
335
357
FKCDRCDYSAARKCNLDQHLAKH
fgenesh2_pg.scaffold_510000016
C2H2 ZF
363
385
YVCDECGYKTADKSNLSKHVRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found