CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_530000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_530000001
T139576_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_530000001
C2H2 ZF
246
269
YKCKECDASFKYSSQRSMHMKQVH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
278
299
LCEQCGYKAPTQHALKLHIYKH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
334
356
YKCAHCSHFAKTKSLLRKHEDAH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
362
387
HKCPVQSCPISSNDRNELIAHLARSH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
393
417
YSCPECDHKTYLLRELKEHMKTFGH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
421
443
YKCDKCEFSAKTYPRLRNHKRGH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
477
499
FQCPHCEFNADTQDDLSIHLGKH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
503
525
VTCDMCGYIAKTKERLEQHIDEH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
534
556
CTTHGCNFVTPDQQCLVRHLTSH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
562
584
FPCEHCDYRAKKKEVLAVHMRLH
fgenesh2_pg.scaffold_530000001
C2H2 ZF
590
612
LKCTKCSYSTSLGHMLRKHEARH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found