CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_53000062
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_53000062
T139577_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_53000062
C2H2 ZF
128
150
YMCGECGYRTDRESHLSQHTRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
156
178
FKCDQCDYSAALKSTLVKHLRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
184
206
YMCGECGYRAAQKSSLTKHMTTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
212
234
YKCDQCSFSSTLKCHLNKHIAKH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
486
508
FACKECPYSTYGKSDLSRHMRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
514
536
YKCDQCDYSAAVKSTLVRHLRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
718
740
FACKECPYSTYGKSQLTQHMRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
746
768
FKCDQCGYSAAVKSTLVKHLRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
887
909
FACKECPYSTYLKSDLSRHMRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
915
937
YKCDQCDYSAAVKSSLVKHLRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
943
965
YMCGECGYRTAQMSCLSKHMRTH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
971
993
YKCDQCSYSARQQSALDNHLKRH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
999
1021
YICRECGYRTITKTNLVRHMRKH
fgenesh2_pg.scaffold_53000062
C2H2 ZF
1027
1050
HACDFCSYSAADKGNLERHITAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found