CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_574000031
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_574000031
T139595_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_574000031
C2H2 ZF
75
97
YMCGECGYRTTHKSKLSKHMRTH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
103
126
YKCDQCDYSAAQKATLDNHIVTKH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
132
154
YMCGECGFRTTGKSKLSSHMRIH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
160
182
YKCDQCDFSAAQKINLVTHQATH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
188
210
YMCGECGYRAAQRSNLSQHMRNH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
216
238
YKCNQCDYSTAWKSSLNYHVKKH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
244
266
YKCDQCDYSTAQKINLDNHYATH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
272
294
YMCGECGYRTTQKPELSRHMRTH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
300
322
YMCDQCDYSAADKSNLDKHLRKH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
328
350
YMCGECGYRTAQKSHVSQHMRIH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
401
423
YKCDQCDYSAAHKSTLKNHLATH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
443
465
YKCGECGYRTVQKSKLSRHMRTH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
471
493
YKCDQCDYSAARKSVLDQHRTKH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
499
521
YMCGECGYRAAQKSDLSRHMRTH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
527
549
YKCKQCDYSAAEKSSLNKHLAKH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
555
577
YMCGECGYRTAQRSTLSKHMRTH
fgenesh2_pg.scaffold_574000031
C2H2 ZF
583
606
YKCNQCDYSAAHKNSLDNHIAAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found