CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_59000117
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_59000117
T139602_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_59000117
C2H2 ZF
10
32
YRCEECSRQFSDLSRLKVHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
38
60
YKCEECSRQFSRLGHLKEHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
66
88
YKCEECSRQFSRLGHLKGHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
94
116
YRCEECCRQFSELGTLKTHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
122
144
YRCEECSKQFSELGHLTNHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
150
172
YKCEECSRKFSELSSLKKHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
178
200
YKCQECSKQFSRLEHLKGHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
206
228
YKCEECSRQFSKLSSLNKHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
234
256
YKCEECSRQFCQMGHLKTHMRIH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
262
284
YKCEECSRQFNQMGHLKTHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
302
324
YKCEECSKQFSQLGHLRGHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
330
352
YKCEECRKQFSEMGDLTKHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
358
380
YRCEECSKQFSQLSNLKTHMQTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
386
408
YKCEECNKQFSELGSLKGHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
414
436
YRCEECSRQFSHLNHLKSHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
442
464
YKCEECSKQFSELGNLKKHMRTH
fgenesh2_pg.scaffold_59000117
C2H2 ZF
470
492
YKCEECSRQFSQLRSLRKHMQTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found