CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_593000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_593000002
T139603_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_593000002
C2H2 ZF
1
22
MCGECGYRTALKSTLSRHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
58
80
YVCVDCGYRTANKNDLSRHIRKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
86
108
YKCDQCDYSATLKANLERHLLQH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
114
136
YMCGECGHRTTQQSALAIHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
142
164
YKCDQCDYSAAQKSNLDSHLANH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
170
192
FMCEECGFRTAHRRHLSRHMKTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
198
220
YMCGECEYKTIQKCDLSRHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
226
248
YKCGQCDYSAAQKSTLERHLLKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
278
300
YKCDQCDYSAARKSSLDSHLLKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
306
328
YMCGECGYRTAVKSHLSRHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
334
356
YKCDQCDYSAARKSSLDSHLLKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
362
384
YMCGECGYRATRRFYLSQHMRRH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
390
412
YKCDQCDYSAAQKSTLKSHLLKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
417
439
YKCDQCDYSAAQKSTLNDHRTKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
445
467
FMCGQCGYRTVVRSHLSRHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
473
495
YKCDECDYSAAQKSTLDSHLRKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
501
523
FMCGECGYRAVQKSALSIHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
529
551
YKCDHCDYSASEKATLNSHVAKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
557
579
FMCGECGYRTAVKSRLSKHMRTH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
585
607
YKCDQCDYSAAHKSNLDNHLLKH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
613
635
YMCGECGYRTTRKSHLSLHMRRH
fgenesh2_pg.scaffold_593000002
C2H2 ZF
641
663
YRCDQCDYSATKKSTLKNHLAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found