CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_61000132
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_61000132
T139606_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_61000132
C2H2 ZF
10
33
FKCQQCDYSATQSHYLKDHVMAIH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
39
62
HKCQHCDYSATQKCALNRHVRARH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
68
91
FKCQHCDYSAKTMRVLKVHVMARH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
97
120
HKCQQCDYSTTQKTALRMHVKARH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
128
151
YKCQHCDYSAAQRGALKVHVMAKH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
157
180
HQCPQCDYSAPRRNTLRMHIKAKH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
215
237
HHCNYCDYSATQKSSLNSHIRGH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
252
274
HKCTQCDYSAMTKQRLNRHMALH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
280
303
FKCEICSYSSIQKQDLERHLAIKH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
309
332
YKCDICDRSLASKAGLKRHMAATH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
366
388
YKCDVCDYSATLKSILKQHMIIH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
394
416
FQCDVCKFSTASKSSLKTHLTIH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
422
444
YKCDICGYATANLSYFKQHVAMH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
450
472
YKCELCDYSTAIRTGLTQHMATH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
478
500
YKCDICGYSAARMSALKKHMTRH
fgenesh2_pg.scaffold_61000132
C2H2 ZF
506
528
YKCDVCSYSSVRLSSLRRHMTIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found