CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_614000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_614000002
T139607_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_614000002
C2H2 ZF
24
46
HSCDECSKQFSTSSKLKCHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
52
74
YICEECSKQFSELGSLKKHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
80
102
YKCEECSKQFSRPGSLKSHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
108
130
YKCEECSRQFSELCSLKTHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
136
158
YKCEECSRQFSQLDDLKKHMHTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
164
186
YKCEECSKQFSQLGNMKTHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
192
214
YICEECSRQFSQLDDLKKHIHTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
220
242
YKCKECSKQFSQLGNLKTHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
248
270
YNCEECSRQFSRLGNLKTHMRTH
fgenesh2_pg.scaffold_614000002
C2H2 ZF
276
298
YRCEECSRQFSHVTSLKAHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found