CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_614000007
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_614000007
T139608_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_614000007
C2H2 ZF
10
32
YKCEECSKQFSELGSLKKHMQTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
38
60
YKCEDCGKQFITLDTLKRHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
66
88
YRCGECDKQFSVLGNLKRHMHTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
94
116
YRCEECNMQFSRLSHLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
122
144
YKCEECSKQFSELCKLKKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
150
172
YRCAECSRQFSRLDHLQKHMRSH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
178
200
YKCEECSKQFSELGKLKRHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
206
228
YRCEVCSKQFSELGSLKKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
234
256
YRCEECSRQFSELGSLEKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
261
281
PYRCSKQFSRLGNLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
287
309
YKCEECSKQFRQLGNLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
315
337
YKCEECSKQFSTPSSLKSHIRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
343
365
YTCEECSSQFSQLGSLKKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
371
393
YRCEECSRQFSRLDDLKKHIRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
399
421
YRCEECSRQFSWLGHLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
427
449
YRCEECSRQFSVQFALKSHMRIH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
455
477
YKCEECSKQFSQLCNLKKHMLTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
483
505
YKCEECSRQFSELGSLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
511
533
YKCEKCSRQFSHINALKSHMQTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
539
561
YTCEECSKQFSQLGNLKKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
581
603
YKCEECSSHFSELGNLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
609
631
YRCEECSRQFSELGNLKKHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
637
659
YKCEECSKQFNELCHLKKHVRIH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
665
687
YGCKECGRQFSEQGNLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
693
715
YRCEECSKQFSEHGNLKTHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
721
743
YKCEECSRQFSQMSRLKNHMRTH
fgenesh2_pg.scaffold_614000007
C2H2 ZF
749
771
YRCKECSKKFSELGNLTKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found