CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_63000121
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_63000121
T139612_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_63000121
C2H2 ZF
25
47
YMCGECGYSTAKKSDLSRHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
81
103
YMCGECGYRTAQKSHLSQHMRIH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
109
131
YKCDQCDYSAAQKITLNDHLRQH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
137
159
YMCGECGYRVTRKSHLFEHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
165
187
FKCGQCDYSAARKSTLDKHLRQH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
219
241
YMCGECGYRATQKSHLFEHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
247
269
YKCDQCDYSAARKFTLCKHLRQH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
275
297
YMCGECGYRATQKSHLSDHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
303
325
FKCHHCDYSAARKFNLDQHLAKH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
331
353
YMCGECGYRATQKSHLFEHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
374
396
YICGECGYRAAHKSTLSRHVRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
402
424
YKCDQCDFSVAKKSDLRYHRTKH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
430
452
FMCGECGYRTARKSHFFEHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
458
480
YKCDQCDYSAAVKATLNQHLKQH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
486
508
YMCGECGYRATNRCNLSGHMRTH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
514
536
YKCDQCEYSAALKSSLKKHQLIH
fgenesh2_pg.scaffold_63000121
C2H2 ZF
542
564
YMCGECGYRATQRSVLSNHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found