CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_635000011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_635000011
T139614_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_635000011
C2H2 ZF
10
32
YKCEQCDYYAARKSHLDEHRMKH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
38
60
YMCGVCGYRTAHQSYLSKHMRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
65
81
PYMCAHRSNLSRHMRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
87
110
YKCDQCEYSTIRKSQLGCHIATKH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
116
138
YMCGECGYRTVEKSKLSVHMRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
144
166
YKCDQCNYSAAKKYTLVTHQATH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
172
194
YMCGECGYRAAQRSSLSQHMRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
200
222
YKCGECGFRAALKSDLARHMRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
228
251
YKCDQCDYSATQKYSVDIHKAAIH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
257
279
YMCGECGYRATQRSTLSKHIRTH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
285
308
YRCDQCEYSTAQKVNLDRHIAAKH
fgenesh2_pg.scaffold_635000011
C2H2 ZF
314
336
FMCGECYFRTARKSTLSKHKRAH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found