CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_635000020
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_635000020
T139617_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_635000020
C2H2 ZF
94
113
DQCGYGAAQKASLSVHMRIH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
121
141
WDQCDYSATQKSHLDKHVAKH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
147
169
YMCGECGYRASYKSILAKHMRTH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
175
197
YKCDLCEYSAAQKSNLDEHLAKH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
203
225
YMCGECGYRATRKDYLSKHMRTH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
231
254
YKCDQCDYSAALKSSLNKHIAAKH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
300
322
YMCGECGHRTAQKADFAKHMRTH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
328
351
YKCHMCDYSAARKFSLDNHMAARH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
357
379
YLCKECGYRTTQKPTLLRHMRTH
fgenesh2_pg.scaffold_635000020
C2H2 ZF
385
408
YKCDQCDYSAAVKVNLDYHVAAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found