CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_64000116
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_64000116
T139621_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_64000116
C2H2 ZF
1
22
MCGECGYRTAYNSNLSQHMRTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
29
43
MTTQKSDLSEHMRTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
49
71
YKCNQCDYSAAHKYNLGRHLAKH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
77
99
YMCGECGYRTVQKSHLFDHMRIH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
105
127
YKCDQCDYSASKKSILDYHLATH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
133
155
YMCGECGFRTARRSALSRHMRRH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
161
183
YKCDQCDYCASRKSTLDQHLAIH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
189
211
YMCGKCGYRTARKFDLVRHMKTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
241
263
YMCGECGYRTAKKSHLSDHMRTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
269
291
YKCNQCDYSAAKKSHVDYHLAKH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
297
319
YMCGKCEYRTAHKSHLSRHMRTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
325
347
YKCEKCDYSAASKYQLDQHQAKH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
353
375
YMCGECGYRTAYKSHLCRHMGTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
381
403
FKCEQCDYSAARKYHLDRHLAKH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
409
431
YMCEECGYRAAQKSHLSRHMRTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
437
459
YKCDQCDYSAAQTSTLNQHLVMH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
465
487
YMCGECGYRTYRKSHLSEHMSTH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
493
515
YTCDQCDYSSATKFNLDRHVSKH
fgenesh2_pg.scaffold_64000116
C2H2 ZF
521
543
YMCWECGSRTILKSALSRHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found