CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_64000123
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_64000123
T139622_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_64000123
C2H2 ZF
60
82
YVCVDCGYRTANKNDLSRHIRKH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
88
110
YKCDQCDYSATLKANLERHLLQH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
116
138
YMCGECGHRTTQQSALAIHMRTH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
144
166
YKCDQCDYSAAQKSNLDSHLANH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
172
194
FMCEECGFRTAHRRHLSRHMRTH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
200
222
YMCGECEYKTIQKCDLSRHMRTH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
228
250
YKCGQCDYSAAQKSTLESHLLKH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
256
278
YMCGECGYRTTKKSTLTQHMRIH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
284
307
HECDKCDYSAAHKSNLDRHLRAEH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
313
335
FMCGECGFRAAHRRHLSGHMRSH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
341
363
YKCDQCDYSAARKHHLDIHVAKH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
369
391
YMCGECEYKATQKSDLSRHMRIH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
397
419
YKCGQCDYSSAQKSTLESHLLKH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
425
447
YMCGECGYRTTKKSTLTQHMRTH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
453
476
YECDKCDYSAAHKSNLDRHLRAEH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
482
504
FMCGECGFRAAHRRHLSGHMRSH
fgenesh2_pg.scaffold_64000123
C2H2 ZF
510
532
YKCDQCDYSAARKHHLDIHVAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found