CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_675000016
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_675000016
T139630_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_675000016
C2H2 ZF
10
32
YQCEECSRQFSHLGHLKTHIRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
39
60
KCEECSRQFSHLSSLKAHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
66
88
YKCEKCTKKFSDLGYLKKHKQTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
94
116
YKCEECSRQFSHLSSLKAHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
122
144
YKCEKCTKKFSRSDHLKKHKQTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
165
187
YRCEECNKQFSQKGNLKIHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
193
215
YMCKECSKQFSQISDLKTHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
221
243
YKCEECSKQFTTTGHLKIHLRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
249
271
YKCEECSKQFTDQGNWRTHLRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
277
299
YKCEECSKQFTTLGSLKMHMQTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
305
327
FQCEECSKQFTSCGGLKRHLQTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
333
355
YKCEECSKQFTTLGYLKIHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
361
383
FQCEECSKQFTSCGGLKRHLQTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
389
411
YKCEECSKQFTTLGYLKIHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
417
439
FQCEECSKQFTNCGSLKSHLRSH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
445
467
FKCEECSKQFSHYCSLKTHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
473
495
YKCEECTKQFTNQGDLKKHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
501
523
FKCEECSKQFTILNTLKIHMRTH
fgenesh2_pg.scaffold_675000016
C2H2 ZF
529
551
YQCVECSKRFSQLGSLKNHMQTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found