CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_677000005
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_677000005
T139632_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_677000005
C2H2 ZF
26
48
HTCGECDKEFRQPNDLKRHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
54
76
FRCEDCGKQFSELSNLKRHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
82
104
YKCDKCNKRCSDKGNLKRHMRVH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
110
132
HKCEDCGRQFSELSNLKKHIRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
138
160
YRCDECSKQFSELSNLKRHMQAH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
166
188
YKCEECGRQFSQLGDLKSHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
194
216
YRCEECGKQFSVLCNLKQHMKTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
222
244
YRCEECSRQFSRLGQLQIHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
250
272
YRCNECGKQFSHHSNLKRHMRNH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
306
328
HKCGECDKEFHKLCNLKNHLRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
334
356
FRCEDCGKQFSMLSNLKRHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
362
384
YKCDKCSKQFSEQGHLKNHMMTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
390
412
YKCEECSKQFSKLCNLNSHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
418
440
YKCEECSKQFSELGSLKSHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
446
468
YRCDGCSKRFSVLYSLKQHMKTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
474
496
YKCEECSRQFSELGRLKRHMWTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
502
524
YRCDECNKQFRVLCNLKQHMKTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
530
552
YRCQECSRQFRQLSNLKSHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
558
580
YRCDGCSKHFSVLYSLKQHMKTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
586
608
YKCEECSRQFSQLGHLKRHMRTH
fgenesh2_pg.scaffold_677000005
C2H2 ZF
614
636
YWCDECSKQFRVLGSLKSHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found