CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_698000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_698000003
T139639_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_698000003
C2H2 ZF
20
42
YRCEECSKQFSKLHDLKRHIRTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
48
70
YRCEECSRMFSELSRLNRHMRTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
76
98
YMCEECNRKFSRQDLLKIHMRSH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
104
126
YRCEECSKQFSQLGHLKTHMLTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
132
154
YRCEECSKQFSQLGHLKIHMRTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
160
182
YRCEECSRQFSELGILKSHMKTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
188
210
YSCEECSKQFSQLGSLKKHMRAH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
216
238
YKCEECSRQFSEQANLKRHIRTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
244
266
YKCEDCSKQFRQLGHLKGHLRTH
fgenesh2_pg.scaffold_698000003
C2H2 ZF
272
294
YKCEECRRQFSELGHLKRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found