CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_7000080
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_7000080
T139642_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_7000080
C2H2 ZF
30
52
YKCEECNKQFSQLCNLKAHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
58
80
YQCGECSTQFSQLSNLKSHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
86
108
YKCEECRKQFSLFHHLEIHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
114
136
YKCEECRKQFRQFHHLKGHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
142
164
FTCEECSRQFSEFGNLKRHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
209
231
YRCEECGKQFSQLCNMKAHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
237
259
YKCEECSRQFSQLSDLKRHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
265
287
YKCEECSKQFSQLCNLKVHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
293
315
YRCEECSRQFSQLGELKKHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
321
343
YKCEECSRRFSVLSHLKTHMRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
349
371
YKCEECSKQFSRQDGLKSHKQTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
377
399
YTCEVCSRQFSRLYSLKRHVRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
405
427
YRCEECSRQFRHLRNLKAHIRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
433
455
YGCGECSRRFSELGALKRHIRTH
fgenesh2_pg.scaffold_7000080
C2H2 ZF
461
483
YKCEECSRQFSVLWNLKTHIRNH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found