CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_7000087
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_7000087
T139646_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_7000087
C2H2 ZF
44
66
YKCEECSRQFSQLGNLKTHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
72
94
YMCEECSRQFNELGHLKRHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
100
121
YGCEKCSKQFSQLGHLKAHMRT
fgenesh2_pg.scaffold_7000087
C2H2 ZF
168
190
YKCEECNKQFSQLGGLKAHVRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
196
218
YRCEECSRQFSQVGHLKSHMQTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
224
246
YRCEKCSKQFSQLGHLNIHMRSH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
252
274
FRCEECSKQFSRMDTLKTHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
280
302
YRCEECSRQFSHLGTLKKHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
308
330
YRCEECSKQFSQLSNLKKHVRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
336
358
YRCEECSKQFSQLSNLKKHVRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
364
386
YRCEECSKQFSRLGHLKGHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
392
414
YRCEECRRQFSLFHHLKNHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
420
442
YRCEECSRQFSQLSDLKRHVRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
448
470
YTCEECSSQFSQLDHLKKHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
476
498
YRCEECSRQFSVLCNLHSHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
504
526
FKCEECNRQFSLLENLKRHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
532
554
YRCEECSRQFSELGTLKTHMRTH
fgenesh2_pg.scaffold_7000087
C2H2 ZF
560
582
YKCEECSKQFSRQYRLKKHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found