CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_7000091
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_7000091
T139648_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_7000091
C2H2 ZF
10
32
YRCEECSRQFSELGHLKTHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
38
60
YRCEECSRQFSRLDTLKKHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
66
88
YRCEECSRQFSELDTLKKHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
94
113
YRCEECSRQFSDWVSEETHA
fgenesh2_pg.scaffold_7000091
C2H2 ZF
121
143
YRCEECIRQFGRLDDLKNHMQTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
149
166
YRCEECSRQFSELGTLKN
fgenesh2_pg.scaffold_7000091
C2H2 ZF
308
330
YRCEECSKQFSVLGALKTHMRSH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
336
358
YMCEECSRQFSRLGHLEEHIRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
364
386
YNCGECSREFRKLGHLTEHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
392
414
YMCEDCSKQFTLFHHLKAHRLTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
420
442
YICDECSRQFSRFGKLKRHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
448
470
YTCEECSKQFSRLGHLKIHIRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
476
498
YRCEECSRQFSLFHHLKTHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
504
526
YKCEECSRQFSQLGAVKEHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
532
554
YQCEQCSRQFVQLVALKTHMRTH
fgenesh2_pg.scaffold_7000091
C2H2 ZF
560
582
YKCEECSRQFSVLGAIKTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found