CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_7000108
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_7000108
T139653_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_7000108
C2H2 ZF
32
54
YRCEECNKQFSQLGNLKAHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
60
82
YKCEECSKQFSELGHLKGHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
88
110
YRCEECRRQFSLFHHLKTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
116
138
YRCEECSRQFSQLSDLKRHVRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
144
166
YTCEECSSQFSQLDHLKKHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
172
194
YRCEECSRQFSVQCNLHSHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
200
222
FKCEECNRQFSLLENLKRHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
228
250
YRCEECSRQFSELGSLKTHLRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
281
303
YRCEECSRQFSQLSNLKAHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
309
331
YRCEECSNQFSLFHHLKAHRMTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
337
359
YICEECSRQFSRFGKLKRHIRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
365
387
YTCEECSKQFSRLGHLKIHIRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
393
415
YRCKECSRQFSQLDSLKKHLRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
421
443
YKCKECSRQFSQLGNLKTHMLTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
449
471
YRCEKCSRQFSDLDDLKKHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
477
499
YKCEECNRQFSRLGHLEEHIRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
505
527
YNCEECSRQFSRLGHLKRHKRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
533
555
YRCEECSRQYSQLCHLKAHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
676
698
YRCEECSKQFSQLCHLKTHLRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
704
726
YKCEECSRQFSQLSDLKRHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
732
754
YRCEKCGGQFSQLGNLNTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
760
782
YRCEECSRQFSLFHHLNTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
788
810
YMCEKCSRQFNELGSLQQHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
816
838
YRCEECSMQFSQLGHLKKHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
844
866
YRCEECSRQFNELNSLKIHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
872
894
YKCEECSRQFSDLRNLKTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
900
922
YRCEECSRQFSELGVLKRHIRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
928
950
YRCEECSSQFSRLYSLKIHMRSH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
956
978
YRCEECGGQFSQLGHLKIHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
984
1006
YRCEECNRQFNELGHLKTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
1012
1034
HNCEECSRQFSNLGHLKTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
1040
1062
YRCEECSRQFSELGHLKTHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
1068
1090
YRCEECSRQFSQLGDLKIHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
1096
1118
YRCEECSRQFSKLDSLKKHMRTH
fgenesh2_pg.scaffold_7000108
C2H2 ZF
1124
1146
YRCEECSRQFSQLDNLKRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found