CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_7000127
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_7000127
T139659_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_7000127
C2H2 ZF
32
54
YKCEECSKQFSHLGDFKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
60
82
YKCEECSRQFSQLGSLIKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
88
110
YKCEECSRQFNQLGHLKRHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
116
138
YKCEECSKQFSVLGVLKSHMRIH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
144
166
YRCEECSRQFSLFHKLKRHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
172
194
YMCEKCSRQFSHVCAMNKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
200
222
YMCEKCSRQFSQLGALKSHMLTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
228
250
YQCGECSRQFSELSNLERHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
256
278
YRCEQCSRQFSHMENLKTHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
284
306
YECEECSRQFSDLGNLKTHMRSH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
312
334
YRCEECSRQFNELGSLKKHIRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
340
362
YRCEECSRQFSELGNLKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
368
390
YRCEECSRQFSRLDDLKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
440
462
YRCEECNKQFSRLDNLKTHVRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
468
490
YRCEECSRQFSQLGHLKEHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
496
518
YRCEECSRQFSQPSDLKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
524
546
YKCEECSKQFSQPGDLKSHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
552
574
YRCEECSKQFSRLDSLKKHLRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
580
602
YKCEECSRQFSQLDSLKTHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
608
630
YRCEECSRQFSQLATLKTHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
636
658
YRCEECSRQFSVLGALKTHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
664
686
YRCEECSRQFSELGALEIHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
692
714
YRCEECDRQFSRLGALKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
720
742
YRCEECDRQFSRLDSLKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
748
770
YRCEECDRQFSRLDSLKKHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
776
798
YMCEECSRQFSQLGALNTHIRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
804
826
YRCDECSKQFSRLDTLKSHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
832
854
YQCEECSRQFSELGSFKKHIRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
860
882
YRCEECSRQFSELGTLKRHIRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
888
910
YMCEQCSRQFSELCALKTHMRTH
fgenesh2_pg.scaffold_7000127
C2H2 ZF
916
933
YKCEECSRQFSETGALKT
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found