CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_80000128
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_80000128
T139678_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_80000128
C2H2 ZF
50
72
YRCEECSRQFSKLSNLKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
78
100
YRCEECSRQFSRLSNLKTHMRAH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
106
128
YRCEGCSRQFSELGHLKTHIRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
134
156
YRCEECSRQFSQLGSLKKHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
162
184
FRCEKCSRQFSKLSNLKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
190
212
YRCEGCSRQFSRLGHLKTHIRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
288
310
YRCEECSRQFSQLGHLTTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
316
338
YRCEECCRQFSQLSALKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
344
366
YRCEECRRQFSRMGDLKSHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
388
402
SSVSWVNLKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
408
430
YKCEECCRQFSQLSNLKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
436
458
YRCEECRRQFSRMGVLKRHMQTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
464
486
YRCEDCSRQFNTLSSLKRHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
492
514
YRCEECSRQFSQLGNLKTHMRTH
fgenesh2_pg.scaffold_80000128
C2H2 ZF
520
542
YSCEECSRQFSQHGDLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found