CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_84000106
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_84000106
T139688_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_84000106
C2H2 ZF
51
73
YRCEACGRQFGKLCDLKRHVRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
79
101
YRCEECGRQFSQLADLNSHKWTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
107
129
FKCEECSKQFGRLLNLKTHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
149
171
CKCEECTRQFSRLGLLKSHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
177
199
YKCEECSRQFSKSGNLKTHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
205
227
YRCEECDWRFGRLGDLKRRVRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
233
254
YRCEACGKQFRQFQHLKRHVRT
fgenesh2_pg.scaffold_84000106
C2H2 ZF
261
283
YMCEKCGIQFNEPRNLKTHIRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
289
311
YMCEACGRQFSRLSTLKSHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
317
339
YKCEECGRQFSQLGALKSHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
345
367
YKCETCSKKFNHLGHLNTHIRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
373
395
YKCEQCSRQFSRIDNLNFHLRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
401
423
YSCEECNKQFGELGNLKKHKTTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
450
472
YRCEVCSMQFCRLSYRKRHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
478
500
HRCDACGHQFSRMRDLKTHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
506
527
YGCGACGKQFTRLNGLTTHMRT
fgenesh2_pg.scaffold_84000106
C2H2 ZF
534
556
FGCEKCSRQFRQLSHLKTHIRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
562
584
YGCGACGRQFTRMNSLKSHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
590
612
YKCEECSRPFTRMNCLKKHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
618
640
YSCEVCDKQFRQLGHLKTHILTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
689
711
YRCEVCSMQFSRLSSRKRHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
717
739
YKCEECSRPFRELGNLKKHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
745
767
YKCEACGHQFCRMRNLKRHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
773
795
YKCEECSRPFSELGTLKKHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
801
823
YGCGECGRQFARMNCLKRHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
829
851
YTCEECSRPFGELGHLKTHMLTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
857
879
YGCGSCGRQFTRLYDLKTHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
885
907
YKCEACGHQFSSMRDLKRHMRTH
fgenesh2_pg.scaffold_84000106
C2H2 ZF
913
935
YGCGACGRQFTRLYRLKTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found