CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_843000014
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_843000014
T139693_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_843000014
C2H2 ZF
10
32
YKCDQCDYSAAHKSWLVKHKRKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
38
60
YMCDECGYRSDRKPTLAQHIRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
66
88
YKCDQCDYSAAVKHHLIDHQTRH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
102
125
YKCDQCDYSAAQKANLDQHIAAKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
130
152
YICGECGFRTAYKDHLSQHMRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
158
180
YKCDQCDYSAAQKSALYKHQEKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
186
208
YVCDVCGYRTPDKSGFSRHMRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
214
236
YKCDQCDFSSARKDDLKKHVANH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
242
264
FMCVECGYRAYTRSVLSVHMRKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
270
292
FKCDLCDYSAARKLTLEQHVMKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
298
320
YMCDQCGYRTAFKSYLSQHIRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
326
348
YKCDQCDYSAAHRSALHRHLAKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
354
376
YMCDVCGYRTPNKSCLSRHMRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
382
404
YMCGECGYRSAKKSDLSKHMRNH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
410
427
YRCDQSYRSHLSRHMRTH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
433
455
YKCDQCDYFAAEKYHLIDHQTKH
fgenesh2_pg.scaffold_843000014
C2H2 ZF
461
483
YLCEKCGYRAAQRSTLSRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found