CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_853000009
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_853000009
T139695_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_853000009
C2H2 ZF
67
89
YKCDQCDYSALQKSSLSDHVRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
95
117
YKCDQCDYSVAHKSNLAQHVLKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
123
145
YMCGECGFRARQKGSLLRHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
151
173
YKCDQCDYSAAEKYNLVEHLRKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
179
199
YMCGECGKTYKSHLSKHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
259
281
YKCDQCDYAAARKSHLDKHLTKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
315
337
YMCGECGYRTARKYTLYEHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
343
365
YKCDQCDYSTGRKFSLEIHLAKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
371
393
YKCDQCDYSAAQKCDLDRHLAKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
399
421
YMCEECGYRTSLKSDLSRHIRIH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
427
449
YKCDQCDYSAAQKFNLVRHLTKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
455
477
YMCGECGFRTTRKSTLLRHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
483
505
YKCDQCDYSAAEQSTLDDHMTKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
511
533
YMCGECGYRTALRASLSRHMKTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
539
561
YKCDLCDYSAARKSTLSAHVKRH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
567
589
YKCDQCDYSTTQKSSFNIHLARH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
595
617
YKCDQCDYSAARKYHLDLHLARH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
623
645
YMCDECGYRAACKSNLSRHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
651
673
FKCDQCDYSATRKSTLHQHVEKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
679
701
YMCGECGYRTNQKSTLSNHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
707
729
YKCDQCDYSAAHKFSLDIHLAKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
735
757
YMCGECGYRTAHKSDLTKHVITH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
789
811
YKCDQCDYSAAQKSTLVIHLAIH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
817
839
YKCDQCGYRTARKSGLSKHMRTH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
845
867
YKCDQCDYSAAHKSSLVIHLAIH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
873
895
YKCDQCDYSATRKFTLELHLRKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
901
923
YMCGECGYRTAQKSDLSKHMITH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
929
951
FKCNQCDFSTGRKSRLDIHLTKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
957
979
FKCGQCDYSAVQKSDLVRHLRKH
fgenesh2_pg.scaffold_853000009
C2H2 ZF
985
1007
YMCGECGYRTSQRSDLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found