CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_88000064
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_88000064
T139699_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_88000064
C2H2 ZF
10
33
YHCGHCDFSAARKDGLFSHVRAVH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
39
62
YKCTYCDYSAAENAQLKNHVMAKH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
96
118
YKCEFCSFATHQKQNLKSHVLTH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
124
146
YKCQVCDYSAIQRGALKIHMLKH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
160
182
HSCPHCEYETINKPAMTQHIRTH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
188
211
FKCQQCDYSASQTATLKKHIRAVH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
261
283
YKCEMCPFATHRKMFLKKHMNTH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
289
311
YKCQFCDYSSALKATLKTHMDTH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
317
339
YKCEICDYSTVGMSYLKLHMANH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
345
367
FHCELCEYSAARKPDLKKHMANH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
373
395
HKCELCDYSATDRSHLKRHMTTH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
401
423
YKCEICEYAAAQISSLRDHMTKH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
429
451
YQCEECDYFTTNKGSLAKHMAKH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
457
479
YMCDVCGFKTGTKSTLAQHTATH
fgenesh2_pg.scaffold_88000064
C2H2 ZF
483
505
HKCDQCDYSAAQIAHLRRHKARH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found