CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_906000004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_906000004
T139703_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_906000004
C2H2 ZF
36
58
YMCRECGYRTAKKFNFSQHIRIH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
64
87
YKCDQCEYSATQKQNLKQHRLYKH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
100
122
YKCDQCDFSAAAKGNLDQHVATH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
152
174
YMCEKCGYRTTHKTHLSRHFRTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
180
202
HRCDQCDYSASEKRSLEIHLAKH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
208
230
YMCEKCGYRTAEKSYLFLHLKTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
236
258
FKCDQCDYSALTKSKLHQHQSKH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
264
286
YNCGECGYKAARKSELSRHMRTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
292
314
YKCDQCDYSASVKSSLDHHIKIH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
320
344
YMCSYRECGYRTAKKSYLPKHMRTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
411
433
YKCDHCDYSAAVKYALVQHLRKH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
439
461
YMCDKCGYRTAKKSYFTFHMKTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
467
489
YNCDLCDYSTARKFHLDQHLARH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
495
517
FMCAECGFRTALKANLSRHMRTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
523
545
YKCDQCDYSAAQKGELDYHVANH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
551
573
YMCGECDFRTSRRPCLTRHMRTH
fgenesh2_pg.scaffold_906000004
C2H2 ZF
579
601
YKCDQCDYSAAQKGTLDKHRKQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found