CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_931000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_931000003
T139710_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_931000003
C2H2 ZF
10
32
YKCGQCDYAAKWKSDLSIHLRIH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
38
60
YKCNHCDYSAARKSSLDLHLTKH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
66
88
YMCGECGYRAGLKSCLTKHMKIH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
122
144
YICGECGYRAGLKSSLLKHMKTH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
150
172
FKCDQCDYSALQKSSLSDHVRTH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
178
200
YKCDQCDYSVAHKSNLAQHLLKH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
206
228
YMCGECGFRAAHKSNPIAHMRTH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
234
256
YKCDQCDYSAAEKYNLVEHLRKH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
262
284
YMCGECGFRAAHKSNSIAHMRTH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
290
312
YKCDQCDYSAAEKYNLVEHLRKH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
318
340
YMCGECGYRTAHKSNLSAHMRTH
fgenesh2_pg.scaffold_931000003
C2H2 ZF
347
368
KCDKCDYSTIPKSHLDQHMMKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found