CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_931000011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_931000011
T139712_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_931000011
C2H2 ZF
1
22
MCGECGYRTNLKSTLSKHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
28
50
YKCDQCDYSAAQKANLDLHLTKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
56
78
YMCGECGYRTARKPDLSRHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
84
106
YKCDQCDYTAARKSYLDDHMTKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
112
134
YMCGECGYRTARKFNLSLHMRIH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
140
162
YKCDQCDYSAAQKSTLVSHQANH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
168
190
YMCGECGYRTARKGGLSRHMKTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
210
232
YMCGECGFRTKQKSDLSIHKRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
238
260
YKCDQCDYSAAGKSALDYHLSKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
266
288
YKCGECGYRTALRSDLSKHARIH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
294
316
YKCDQCDYAAARKSHLDDHLTKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
322
344
YMCGECGYRTTRQSYLSKHMIIH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
350
372
HMCGKCGYRAAYKSNLSIHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
378
400
YKCDQCDYSAARKSHLDKHLTKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
406
428
YMCGECGYRTTQKAHLSRHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
434
456
YKCDQCDYSAAEKSTLDQHLTKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
462
484
YMCRECGYRTYLRSNLSRHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
490
512
FKCDQCDYSAGNKYSLDIHLANH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
518
540
YKCDDCDYSAAQKSDLDQHLKKH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
546
568
YMCGECGYRAARKSTLSEHMRTH
fgenesh2_pg.scaffold_931000011
C2H2 ZF
574
596
YKCDQCDYSAGRKSSLNKHMTKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found