CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_931000013
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_931000013
T139713_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_931000013
C2H2 ZF
10
32
YKCDQCDYSATQKSSLDSHLVKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
38
60
YMCDHCDYSAAHKASLNFHLAKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
66
88
YMCGECGYRTAHKADLSKHMRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
94
116
YKCDQCDYSAARKSHLSAHMRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
122
144
YTCDQCDYSAAQKFNLDQHLTKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
150
172
YMCGECGYRAAQKLTLSKHSRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
178
200
YRCDQCDYAAARKSDLDKHFPKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
206
228
YMCGECGYRAAIKSDLSRHMRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
234
257
YKCVQCDYSAAVKSTLDWHIAAKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
263
285
YMCGECGYRAAQKSHLAEHMRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
346
368
YICKECGYRVGSPIALRQHMKTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
374
396
YKCDHCEYSATWKSNLDRHLAKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
402
424
YMCGECGYRTSLKSTLSIHMRTH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
430
452
FKCDQCDYSAAQRCSLDSHVAKH
fgenesh2_pg.scaffold_931000013
C2H2 ZF
458
480
YMCGECGYWTTRKQHLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found